RESOURCES
Publications
Method papers behind each assay, plus customer studies that used Arraystar RNA modification technologies. Customer entries are ordered by journal impact factor.
01Customer publications (RNA modification)
Studies that used Arraystar RNA modification services and products: epitranscriptomic arrays, small RNA modification arrays, the m6A single-nucleotide array, MeRIP-seq and LC-MS modification analysis. The list is sorted by journal impact factor from high to low.
Entries come from the Arraystar customer publication workbook (July 2026). Titles, authors, journals and years are kept as recorded. Impact factors follow the same sheet; where a journal has no listed IF the entry sits at the end of the table.
Scope filter: RNA modification product lines only (146 papers). Expression-only arrays, DNA methylation chips and generic RNA-seq are not listed here.
| Title | Author | Journal | Year | IF | Technology |
|---|---|---|---|---|---|
| Unconventional secretion of Magnaporthe oryzae effectors in rice cells is regulated by tRNA modification and codon usage control | Li G,et al | Nature Microbiology | 2023 | 28.3 | LC-MS RNA Modification Analysis |
| METTL3/IGF2BP3 axis inhibits tumor immune surveillance by upregulating N6-methyladenosine modification of PD-L1 mRNA in breast cancer | Wan W, et al. | Molecular Cancer | 2022 | 27.4 | mRNA & lncRNA Epitranscriptomic Array |
| METTL14-mediated m6A modification of circORC5 suppresses gastric cancer progression by regulating miR-30c-2-3p/AKT1S1 axis | Fan H N, et al. | Molecular Cancer | 2022 | 27.4 | circRNA Epitranscriptomic Array |
| Intranuclear paraspeckle-circular RNA TACC3 assembly forms RNA-DNAhybridstofacilitate MASH-related hepatocellular carcinoma growth in an m6A-dependent manner | Fu J, et al | Cancer Commun (Lond) | 2025 | 24.9 | circRNA Epitranscriptomic Array · m6A |
| Specific RNA m6A modification sites in bone marrow mesenchymal stem cells from the jawbone marrow of type 2 diabetes patients with dental implant failure | Yan W,et al | International Journal of Oral Science | 2023 | 24.9 | mRNA & lncRNA Epitranscriptomic Array |
| o8G Site-Specifically Modified tRF-1-AspGTC: A Novel Therapeutic Target and Biomarker for Pulmonary Hypertension | Zhang J,et al | Circulation Research | 2024 | 20.1 | Small RNA Modification Array |
| Prenatal cadmium exposure and male infertility in mice: A multi-generational mechanistic study | Hualong Zhu,et al | Eco-Environment & Health | 2026 | 17.6 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Multigenerational paternal obesity enhances the susceptibility to male subfertility in offspring via Wt1 N6-methyladenosine modification | Xiong Y W,et al | Nature Communications | 2024 | 16.6 | mRNA & lncRNA Epitranscriptomic Array |
| RNA N6-methyladenosine modification_x0002_based biomarkers for absorbed ionizing radiation dose estimation | Chen H,et al | Nature Communications | 2023 | 16.6 | mRNA & lncRNA Epitranscriptomic Array |
| WTAP-mediated m6A modification of lncRNA DIAPH1-AS1 enhances its stability to facilitate nasopharyngeal carcinoma growth and metastasis | Li Z X, et al. | Cell Death & Differentiation | 2022 | 15.83 | mRNA & lncRNA Epitranscriptomic Array |
| The m7G Methyltransferase Mettl1 Drives Cardiac Hypertrophy by Regulating SRSF9-Mediated Splicing of NFATc4 | Yu S,et al | Advanced science | 2024 | 15.1 | mRNA & lncRNA Epitranscriptomic Array |
| Ribosome changes reprogram translation for chemosurvival in G0 leukemic cells | Datta C,et al | Science Advances | 2022 | 14.96 | LC-MS RNA Modification Analysis |
| Increased PTCHD4 expression via m6A modification of PTCHD4 mRNA promotes senescent cell survival | Rossi M,et al | Nucleic acids research | 2024 | 14.9 | mRNA & lncRNA Epitranscriptomic Array |
| METTL7A-mediated m6A modification of corin reverses bisphosphonates-impaired osteogenic differentiation of orofacial BMSCs | Jin Y,et al | International Journal of Oral Science | 2024 | 14.9 | mRNA & lncRNA Epitranscriptomic Array |
| A Novel tsRNA, m7G-3′ tiRNA Lys TTT , Promotes Bladder Cancer Malignancy Via Regulating ANXA2 Phosphorylation | Ying X,et al | Advanced Science | 2024 | 14.3 | Small RNA Modification Array · m7G |
| Sperm Rhoa m6A modification mediates intergenerational transmission of paternally acquired hippocampal neuronal senescence and cognitive deficits after combined exposure to environmental cadmium and high-fat diet in mice | Zhang J,et al | Journal of Hazardous Materials | 2023 | 14.22 | mRNA & lncRNA Epitranscriptomic Array |
| N6 -methyladenosine plays a dual role in arsenic carcinogenesis by temporal-specific control of core target AKT1 | Zhao T,et al | Journal of Hazardous Materials | 2022 | 14.22 | mRNA & lncRNA Epitranscriptomic Array |
| m 5 C‐Modified tRF3b‐Cys GCA ‐23 Suppresses Bladder Cancer Malignancy by Repressing H3K18 Lactylation via Stabilizing RBM4 | Xiaoling Ying, et al | Advanced Science | 2026 | 14.1 | Small RNA Modification Array · m⁵C |
| PGE2‐EP3 axis promotes brown adipose tissue formation through stabilization of WTAP RNA methyltransferase | Tao X, et al. | The EMBO Journal | 2022 | 14.01 | mRNA & lncRNA Epitranscriptomic Array |
| Elp3-mediated codon-dependent translation promotes mTORC2 activation and regulates macrophage polarization | Chen D,et al | The EMBO Journal | 2022 | 14.01 | LC-MS RNA Modification Analysis |
| N6 -methyladenosine promotes aberrant redox homeostasis required for arsenic carcinogenesis by controlling the adaptation of key antioxidant enzymes | Zhao T,et al | Journal of Hazardous Materials | 2023 | 13.6 | mRNA & lncRNA Epitranscriptomic Array |
| AquIRE reveals the mechanisms of clinically induced RNA damage and the conservation and dynamics of glycoRNAs | Zijian Zhang, et al | Nucleic Acids Research | 2026 | 13.1 | LC-MS RNA Modification Analysis |
| m5C-modified circRREB1 promotes lung cancer progression by inducing mitophagy | Cai D, et al | Journal of Experimental & Clinical Cancer Research | 2025 | 12.8 | circRNA Epitranscriptomic Array · m5c |
| METTL3-mediated pre-miR-665/DLX3 m 6 A methylation facilitates the committed differentiation of stem cells from apical papilla | Gu T,et al | Experimental & Molecular Medicine | 2024 | 12.8 | mRNA & lncRNA Epitranscriptomic Array |
| m7G-modified mt-tRF3b-LeuTAA regulates mitophagy and metabolic reprogramming via SUMOylation of SIRT3 in chondrocytes | Long D, et al | Biomaterials | 2024 | 12.8 | Small RNA Modification Array · m7G |
| Brain neuronal CG9593/ANGPTL4 activation mediates paternally acquired motor disorders | Jin Zhang, et al | Science Advances | 2026 | 12.5 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| N6-methyladenosine hypomethylation of circGPATCH2L regulates DNA damage and apoptosis through TRIM28 in intervertebral disc degeneration | Chen Z,et al | Cell Death & Differentiation | 2023 | 12.4 | circRNA Epitranscriptomic Array |
| Elongator and codon bias regulate protein levels in mammalian peripheral neurons | Goffena J, et al. | Nature Communications | 2018 | 11.8 | LC-MS RNA Modification Analysis |
| Loss of tRNA-modifying enzyme Elp3 activates a p53-dependent antitumor checkpoint in hematopoiesis | Rosu A, et al. | Journal of Experimental Medicine | 2021 | 11.74 | LC-MS RNA Modification Analysis |
| ALKBH5 regulates cardiomyocyte proliferation and heart regeneration by demethylating the mRNA of YTHDF1 | Han Z, et al. | Theranostics | 2021 | 11.56 | mRNA & lncRNA Epitranscriptomic Array |
| WTAP/YTHDF1-mediated m6A modification amplifies IFN-γ-induced immunosuppressive properties of human MSCs | Chen Q,et al | Journal of Advanced Research | 2024 | 11.4 | mRNA & lncRNA Epitranscriptomic Array |
| METTL3 promotes colorectal carcinoma progression by regulating the m6A–CRB3–Hippo axis | Pan J, et al. | Journal of Experimental & Clinical Cancer Research | 2022 | 11.16 | mRNA & lncRNA Epitranscriptomic Array |
| RBM15 facilitates laryngeal squamous cell carcinoma progression by regulating TMBIM6 stability through IGF2BP3 dependent | Wang X, et al. | Journal of Experimental & Clinical Cancer Research | 2021 | 11.16 | mRNA & lncRNA Epitranscriptomic Array |
| m6A modification of HSATIII lncRNAs regulates temperature‐dependent splicing | Ninomiya K, et al. | The EMBO Journal | 2021 | 9.9 | MeRIP-seq |
| CircUGGT2 downregulation by METTL14-dependent m6A modification suppresses gastric cancer progression and cisplatin resistance through interaction with miR 186-3p/MAP3K9 axis | Chen X,et al | Pharmacological research | 2024 | 9.3 | circRNA Epitranscriptomic Array |
| N6‑methyladenosine‑modified SRPK1 promotes aerobic glycolysis of lung adenocarcinoma via PKM splicing | Wang A,et al | Cellular & Molecular Biology Letters | 2024 | 9.2 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| N6-methyladenosine demethylase FTO regulates synaptic and cognitive impairment by destabilizing PTEN mRNA in hypoxic ischemic neonatal rats | Deng J,et al | Cell Death & Disease | 2023 | 9 | mRNA & lncRNA Epitranscriptomic Array |
| High glucose induces tau hyperphosphorylation in hippocampal neurons via inhibition of ALKBH5-mediated Dgkh m6 A demethylation: a potential mechanism for diabetic cognitive dysfunction | Qu M,et al | Cell Death & Disease | 2023 | 9 | mRNA & lncRNA Epitranscriptomic Array |
| ALKBH5-mediated m6A mRNA Methylation Governs Human Embryonic Stem Cell Cardiac Commitment | Han Z, et al. | Molecular Therapy-Nucleic Acids | 2021 | 8.89 | mRNA & lncRNA Epitranscriptomic Array |
| m6A methylation of precursor-miR-320/RUNX2 controls osteogenic potential of bone marrow-derived mesenchymal stem cells | Yan G, et al. | Molecular Therapy-Nucleic Acids | 2019 | 8.89 | mRNA & lncRNA Epitranscriptomic Array |
| RBM15-mediated N6-methyladenosine modification affects COVID-19 severity by regulating the expression of multitarget genes | Meng Y, et al. | Cell Death & Disease | 2021 | 8.47 | mRNA & lncRNA Epitranscriptomic Array |
| ALKBH5 suppresses tumor progression via an m 6 A-dependent epigenetic silencing of pre-miR-181b-1/YAP signaling axis in osteosarcoma | Yuan Y, et al. | Cell Death & Disease | 2021 | 8.47 | mRNA & lncRNA Epitranscriptomic Array |
| METTL3-mediated m6A modifcation of SIRT1 mRNA inhibits progression of endometriosis by cellular senescence enhancing | Wang X,et al | Journal of Translational Medicine | 2023 | 8.44 | mRNA & lncRNA Epitranscriptomic Array |
| Circular RNA circDhx32 promotes cardiac inflammatory responses in mouse cardiac ischemia-reperfusion injury via binding to FOXO1 competed with AdipoR1 | Si W, et al | Acta Pharmacologica Sinica | 2025 | 8.4 | circRNA Epitranscriptomic Array · m6A |
| Delineating Brainstem CircRNAs role in Neonatal sepsis | Alves M,et al | Physiology | 2024 | 8.4 | circRNA Epitranscriptomic Array |
| The potential roles of m6 A modification in regulating the inflammatory response in microglia | Li Q, et al. | Journal of Neuroinflammation | 2021 | 8.32 | mRNA & lncRNA Epitranscriptomic Array |
| FTO/IGF2BP2-mediated N6 methyladenosine modification in invasion and metastasis of thyroid carcinoma via CDH12 | Chen Z, et al | cell death & disease | 2024 | 8.1 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Transient Focal Ischemia Significantly Alters the m6A Epitranscriptomic Tagging of RNAs in the Brain | Chokkalla A K, et al. | Stroke | 2019 | 7.91 | mRNA & lncRNA Epitranscriptomic Array |
| Linking oxysterols and different stages of mild cognitive impairment: insights from gut metabolites and N6-methyladenosine | Wen F, et al | Alzheimer's Research & Therapy | 2025 | 7.9 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Magnesium ions facilitate osteogenic differentiation and intervertebral fusion via m6A | Haocheng Xu, et al | Journal of Orthopaedic Translation | 2026 | 7.8 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Loss of m6A methyltransferase METTL3 promotes heart regeneration and repair after myocardial injury | Gong R, et al. | Pharmacological Research | 2021 | 7.66 | mRNA & lncRNA Epitranscriptomic Array |
| GLIS1 alleviates cell senescence and renal fibrosis through PGC1-α mediated mitochondrial quality control in kidney aging | Xu L,et al | Free Radical Biology and Medicine | 2023 | 7.4 | mRNA & lncRNA Epitranscriptomic Array |
| The Combined Effects of circRNA Methylation Promote Pulmonary Fibrosis | Wang S, et al. | American Journal of Respiratory Cell and Molecular Biology | 2022 | 6.91 | circRNA Epitranscriptomic Array |
| Mettl1 knockdown alleviates cardiac I/R injury in mice by inactivating the Mettl1-CYLD-P53 positive feedback loop | Yu S, et al | acta pharmacologica sinica | 2024 | 6.9 | mRNA & lncRNA Epitranscriptomic Array · m7G |
| Integrated multi-omics analysis identifies potential therapeutic targets for Alzheimer’s disease | Li H, et al | Neural Regen Res | 2025 | 6.7 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Mettl14 Attenuates Cardiac Ischemia/Reperfusion Injury by Regulating Wnt1/β-Catenin Signaling Pathway | Pang P, et al. | Frontiers in cell and developmental biology | 2021 | 6.68 | mRNA & lncRNA Epitranscriptomic Array |
| MTHFD2 links RNA methylation to metabolic reprogramming in renal cell carcinoma | Green N H, et al. | Oncogene | 2019 | 6.63 | MeRIP-seq |
| Analisi epitrascrittomica rivela firme cliniche e molecolari nel glioblastoma | Elisa Lazzari | Acta Neuropathologica Communications | 2026 | 6.5 | m6A Single-Nucleotide Array |
| WTAP-Mediated N6-Methyladenosine of RNAs Facilitate the Pathophysiology of Atopic Dermatitis | Tan L,et al | Journal of Investigative Dermatology | 2023 | 6.5 | mRNA & lncRNA Epitranscriptomic Array |
| m6A reader IGF2BP2 promotes lymphatic metastasis by stabilizing DPP4 in papillary thyroid carcinoma | Wang W,et al | Cancer Gene Therapy | 2023 | 6.4 | mRNA & lncRNA Epitranscriptomic Array |
| M6A -mediated lncRNA SCIRT stability promotes NSCLC progression through binding to SFPQ and activating the PI3K/Akt pathway | Cheng Y, et al | Cellular and Molecular Life Sciences | 2025 | 6.2 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Epitranscriptomic analysis reveals clinical and molecular signatures in glioblastoma | Glaucia Maria de Mendonça Fernandes, et al | Acta Neuropathologica Communications | 2025 | 6.2 | m6A Single-Nucleotide Array |
| Papillary Renal Cell Carcinomas Rewire Glutathione Metabolism and Are Deficient in Both Anabolic Glucose Synthesis and Oxidative Phosphorylation | Ahmad A A, et al. | Cancers | 2019 | 6.16 | LC-MS RNA Modification Analysis |
| Phytophthora capsici infection causes dynamic alterations in tRNA modifications and their associated gene candidates in black pepper | Usha A,et al | Computational and Structural Biotechnology Journal | 2022 | 6.16 | LC-MS RNA Modification Analysis |
| YTHDC1 maintains trophoblasts function by promoting degradation of mA6-modified circMPP1 | Wang D,et al | Biochemical Pharmacology | 2023 | 6.1 | circRNA Epitranscriptomic Array |
| M6A RNA methylation-mediated TUG1 stability maintains mitochondrial homeostasis during kidney aging by epigenetically regulating PGC1-α expression | Zhu Y, et al | Antioxidants & Redox Signaling | 2024 | 5.9 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| m6 A-modified circFOXK2 targets GLUT1 to accelerate oral squamous cell carcinoma aerobic glycolysis | Cui Y,et al | Cancer Gene Therapy | 2022 | 5.85 | circRNA Epitranscriptomic Array |
| WTAP dysregulation-mediated HMGN3-m6A modification inhibited trophoblast invasion in early-onset preeclampsia | Bian Y,et al | The FASEB Journal | 2022 | 5.83 | mRNA & lncRNA Epitranscriptomic Array |
| Exploring CircRNA N6-methyladenosine in human rheumatoid arthritis: Hyper-methylated hsa_circ_0007259 as a potential biomarker and its involvement in the hsa_circ_0007259/hsa_miR-21-5p/STAT3 axis | Luo H,et al | International Immunopharmacology | 2023 | 5.6 | circRNA Epitranscriptomic Array |
| TRMT10C-mediated m7G modification of circFAM126A inhibits lung cancer growth by regulating cellular glycolysis | Zhao Q, et al | Cell Biology and Toxicology | 2024 | 5.3 | circRNA Epitranscriptomic Array · m7G |
| Serum extracellular vesicles 3’tRF-ThrCGTand 3’tRF-mtlleGAT combined with tumor markers can serve as minimally invasive diagnostic predictors for colorectal cancer | Wang X, et al | Cancer Cell International | 2024 | 5.3 | Small RNA Modification Array · pseudouridine (ψ) |
| Alteration of N6-Methyladenosine RNA Profiles in Cisplatin-Induced Acute Kidney Injury in Mice | Li C M, et al. | Frontiers in Molecular Biosciences | 2021 | 5.25 | mRNA & lncRNA Epitranscriptomic Array |
| METTL3 modulates m6A modification of CDC25B and promotes head and neck squamous cell carcinoma malignant progression | Guo Y, et al. | Experimental hematology & oncology | 2022 | 5.13 | mRNA & lncRNA Epitranscriptomic Array |
| Long Noncoding RNA and mRNA m6A Modification Analyses of Periodontal Ligament Stem Cells from the Periodontitis Microenvironment Exposed to Static Mechanical Strain | Sun W,et al | Stem Cells International | 2022 | 5.13 | mRNA & lncRNA Epitranscriptomic Array |
| Deletion of Elongator Protein 1 (Elp1) relieves heterochromatin defects in a Pol II mutant of Schizosaccharomyces pombe | Mamta B Nirmal | Genetics | 2025 | 5.1 | LC-MS RNA Modification Analysis |
| YTH N6-methyladenosine RNA Binding Protein 1 Inhibits Smooth Muscle Cell Phenotypic Modulation and Neointimal Hyperplasia | Tian K, et al | cells | 2025 | 5.1 | MeRIP-seq · m6A |
| Morphine‑Driven m6A Epitranscriptomic Neuroadaptations in Primary Cortical Cultures | Dabrowski K R,et al | Molecular neurobiology | 2024 | 5.1 | mRNA & lncRNA Epitranscriptomic Array |
| Loss of Elp1 in cerebellar granule cell progenitors models ataxia phenotype of Familial Dysautonomia | Arnskötter F,et al | Neurobiology of disease | 2024 | 5.1 | LC-MS RNA Modification Analysis |
| Recruitment of PVT1 Enhances YTHDC1‑Mediated m6A Modification of IL‑33 in Hyperoxia‑Induced Lung Injury During Bronchopulmonary Dysplasia | Bao T,et al | Inflammation | 2023 | 5.1 | mRNA & lncRNA Epitranscriptomic Array |
| Subtype-Specific m6A circRNA Methylation Patterns Identify Epigenetic Biomarker Candidates of Potential Diagnostic and Prognostic Significance in Breast Cancer | A Qattan, et al | International Journal of Molecular Sciences | 2026 | 4.9 | circRNA Epitranscriptomic Array · m6A |
| Off-Target Inhibition of Human Dihydroorotate Dehydrogenase (hDHODH) Highlights Challenges in the Development of Fat Mass and Obesity-Associated Protein (FTO) Inhibitors | Marco Tarullo, et al | ACS Pharmacology & Translational Science | 2024 | 4.9 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Chronic Hexavalent Chromium Exposure Up-regulates the RNA Methyltransferase METTL3 Expression to Promote Cell Transformation, Cancer Stem Cell-like Property and Tumorigenesis | Wang Z, et al. | Toxicological Sciences | 2022 | 4.85 | circRNA Epitranscriptomic Array |
| Advanced glycation end products alter the m6A-modified RNA profiles in human dermal fibroblasts | Ouyang M, et al. | Epigenomics | 2022 | 4.78 | mRNA & lncRNA Epitranscriptomic Array |
| Bioinformatics analysis integrating metabolomics of m6A RNA microarray in intervertebral disc degeneration | Wang X, et al. | Epigenomics | 2020 | 4.78 | mRNA & lncRNA Epitranscriptomic Array · 1812253 |
| Comprehensive analyses of molecular features, prognostic values, and regulatory functionalities of m6 A-modifed long non-coding RNAs in lung adenocarcinoma | Zhang M,et al | Frontiers in Genetics | 2022 | 4.77 | mRNA & lncRNA Epitranscriptomic Array |
| METTL3-m6A methylation inhibits the proliferation and viability of type II alveolar epithelial cells in acute lung injury by enhancing the stability and translation efficiency of Pten mRNA | Wang Q, et al | Respiratory research | 2024 | 4.7 | mRNA & lncRNA Epitranscriptomic Array |
| The Use of Identified Hypoxia-related Genes to Generate Models for Predicting the Prognosis of Cerebral Ischemia‒reperfusion Injury and Developing Treatment Strategies | Sun K, et al | Molecular Neurobiology | 2024 | 4.6 | mRNA & lncRNA Epitranscriptomic Array · m6A (cites GPL25916) |
| Characterization of the Expressions and m6A Methylation Modification Patterns of mRNAs and lncRNAs in a Spinal Cord Injury Rat Model | Liu X,et al | Molecular neurobiology | 2024 | 4.6 | mRNA & lncRNA Epitranscriptomic Array |
| Exploring the Roles of m6A‑Modifed circRNAs in Myasthenia Gravis Based on Multi‑Omics Analysis | Li S,et al | Molecular Neurobiology | 2024 | 4.6 | circRNA Epitranscriptomic Array |
| Elongator Subunit 3 (Elp3) Is Required for Zebrafish Trunk Development | Rojas-Benítez D, et al. | International Journal of Molecular Sciences | 2020 | 4.56 | LC-MS RNA Modification Analysis |
| High-throughput microarray reveals the epitranscriptome-wide landscape of m6A-modified circRNA in oral squamous cell carcinoma | Zhao W,et al | BMC genomics | 2022 | 4.55 | circRNA Epitranscriptomic Array |
| The m6A reader IGF2BP1 attenuates the stability of RPL36 and cell proliferation to mediate benzene hematotoxicity by recognizing m6A modification | Wang J,et al | Toxicology | 2024 | 4.5 | mRNA & lncRNA Epitranscriptomic Array |
| N6-Methyladenosine RNA Modification Landscape in the Occurrence and Recurrence of Nasopharyngeal Carcinoma | Wang Y M,et al | World Journal of Oncology | 2022 | 4.45 | mRNA & lncRNA Epitranscriptomic Array |
| N6-methyladenosine regulates metabolic remodeling in kidney aging through transcriptional regulator GLIS1 | Xu L, et al | BMC Biology | 2025 | 4.4 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| m6A demethylase Fto inhibited macrophage activation and glycolysis in diabetic nephropathy via m6A/Npas2/Hif-1α axis | Zhu S, et al | Faseb Journal | 2025 | 4.4 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Stroke triggers dynamic m6A reprogramming of cerebral circular RNAs | Mehta S L,et al | Neurochemistry international | 2024 | 4.4 | circRNA Epitranscriptomic Array |
| Human m6A-mRNA and lncRNA epitranscriptomic microarray reveal function of RNA methylation in hemoglobin H-constant spring disease | Ruan H, et al. | Scientific Reports | 2021 | 4.38 | mRNA & lncRNA Epitranscriptomic Array |
| Alteration of the N6-methyladenosine epitranscriptomic profile in synthetic phthalate-treated human induced pluripotent stem cell-derived endothelial cells | Jousma J,et al | Epigenomics | 2022 | 4.36 | mRNA & lncRNA Epitranscriptomic Array |
| METTL3-Mediated m6A Modification Regulates the Osteogenic Differentiation through LncRNA CUTALP in Periodontal Mesenchymal Stem Cells of Periodontitis Patients | Chen X,et al | Stem Cells International | 2024 | 4.3 | mRNA & lncRNA Epitranscriptomic Array |
| RNA N6-Methyladenosine Affects Copper-Induced Oxidative Stress Response in Arabidopsis thaliana | Sharma B,et al | Non-Coding RNA | 2024 | 4.3 | MeRIP-seq |
| Splicing factor TRA2A contributes to esophageal cancer progression via a noncanonical role in lncRNA m6A methylation | Bei M, et al | Cancer Science | 2023 | 4.3 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Alteration of m6A epitranscriptomic tagging of ribonucleic acids after spinal cord injury in mice | Ni S,et al | Frontiers in Neuroscience | 2022 | 4.3 | mRNA & lncRNA Epitranscriptomic Array |
| METTL3 promotes human amniotic epithelial stem cells differentiation into insulin-producing cells by regulation of MaFA expression | Luo Y, et al | Biochimica et Biophysica Acta-molecular Basis of Disease | 2025 | 4.2 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Analysis of N6-methyladenosine-modified mRNAs in diabetic cataract | Cai L,et al | World Journal of Diabetes | 2023 | 4.2 | mRNA & lncRNA Epitranscriptomic Array |
| Function and Prognostic Value of N6-Methyladenosine-modified RNAs in Lung Adenocarcinoma | Liu J,et al | The Journal of Gene Medicine | 2022 | 4.15 | mRNA & lncRNA Epitranscriptomic Array |
| A defined N6-methyladenosine (m 6 A) profile conferred by METTL3 regulates muscle stem cell/myoblast state transitions | Gheller B J, et al. | Cell Death Discovery | 2020 | 4.11 | MeRIP-seq |
| RNA m6A Modification Changes in Postmortem Nucleus Accumbens of Subjects with Alcohol Use Disorder: A Pilot Study | Liu Y, et al. | Genes | 2022 | 4.1 | mRNA & lncRNA Epitranscriptomic Array |
| N6-methyladenosine promotes osteogenic differentiation of PDLSCs from periodontitis patients | Zhang X,et al | Oral Diseases | 2022 | 4.07 | mRNA & lncRNA Epitranscriptomic Array |
| Alteration of the N6 -methyladenosine methylation landscape in a mouse model of polycystic ovary syndrome | Zou L,et al | Journal of Ovarian Research | 2023 | 4 | mRNA & lncRNA Epitranscriptomic Array |
| Chronic allergic asthma alters m6 A epitranscriptomic tagging of mRNAs and lncRNAs in the lung | Ni X,et al | Bioscience Reports | 2022 | 3.98 | mRNA & lncRNA Epitranscriptomic Array |
| Chronic allergic asthma alters m6 A epitranscriptomic tagging of mRNAs and lncRNAs in the lung | Ni X,et al | Bioscience Reports | 2022 | 3.98 | mRNA & lncRNA Epitranscriptomic Array |
| Correlations of m6A methylation-related mRNAs with thyroid cancer | Jiang Z, et al | Sci Rep | 2026 | 3.9 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Microarray analysis of genes with differential expression of m6A methylation in lung cancer | Wu S, et al. | Bioscience Reports | 2021 | 3.84 | mRNA & lncRNA Epitranscriptomic Array |
| WTAP promotes oesophageal squamous cell carcinoma development by decreasing CPSF4 expression in an m6 A‑dependent manner | Luo Q,et al | Medical Oncology | 2022 | 3.74 | mRNA & lncRNA Epitranscriptomic Array |
| LncRNA and mRNA m6A modification profile and functional network in sepsis-induced acute lung injury | Yanli Yang , et al | Experimental and Molecular Pathology | 2026 | 3.7 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| m6A modifications of circular RNAs in ischemia-induced retinal neovascularization | Zhou Y,et al | International Journal of Medical Sciences | 2023 | 3.64 | circRNA Epitranscriptomic Array |
| The significance of m6A-circFOXK2 in CD4+T cells from patients with rheumatoid arthritis and circFOXK2 correlates with Th17 % and autophagy | Luo Q, et al | Journal of Translational Autoimmunity | 2025 | 3.6 | circRNA Epitranscriptomic Array · m6A |
| Expression profiling of N6-methyladenosine modified circRNAs in acute myeloid leukemia | Issah M A, et al. | Biochemical and Biophysical Research Communications | 2022 | 3.58 | circRNA Epitranscriptomic Array |
| Severe Burn Injury Significantly Alters the Gene Expression and m6A Methylation Tagging of mRNAs and lncRNAs in Human Skin | Ran Y,et al | Journal of Personalized Medicine | 2023 | 3.51 | mRNA & lncRNA Epitranscriptomic Array |
| N6-methyladenosine modifications of mRNAs and long noncoding RNAs in oxygen-induced retinopathy in mice | Peng Y, et al. | Experimental Eye Research | 2022 | 3.47 | mRNA & lncRNA Epitranscriptomic Array |
| Fusarium infection alters the m6A-modified transcript landscape in the cornea | Jianzhang Hu,Yi Lin | Experimental Eye Research | 2020 | 3.47 | mRNA & lncRNA Epitranscriptomic Array · 1909093 |
| RNAs m6A Modification Facilitates UVB-induced Photoaging | Zhang S, et sl | Heliyon | 2024 | 3.4 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Comprehensive analysis of transcriptome-wide m6A methylome in intermediate-stage Esophageal squamous cell carcinoma | Jia X,et al | Pathology-Research and Practice | 2022 | 3.31 | mRNA & lncRNA Epitranscriptomic Array |
| Dynamic alterations in m6A RNA methylation profiles during involution of infantile hemangiomas | Wu P, et al | Front Oncol | 2025 | 3.3 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| M6A-dependent regulation of microRNAs from CKD stage 5 patients: insights from epigenetic modification analysis | Zhiqian Yang, et al | Epigenetics | 2026 | 3.2 | Small RNA Modification Array |
| METTL3 alleviates renal tubular mitochondrial dysfunction by regulating the TUG1/PGC-1a axis in an IGF2BP2-dependent manner in diabetic nephropathy | Chen T, et al | Renal Failure | 2025 | 3 | m6A Single-Nucleotide Array |
| Deciphering the interplay between SETD2 mediated H3K36me3 and RNA N6-methyladenosine in clear cell renal cell carcinoma (ccRCC) | Shafiq Shaikh, et al | Epigenetics | 2025 | 2.9 | LC-MS RNA Modification Analysis |
| Alteration of N6-methyladenosine Modification Profiles in the Neutrophilic RNA Following Ischemic Stroke | Fan J,et al | Neuroscience | 2024 | 2.9 | mRNA & lncRNA Epitranscriptomic Array |
| Epitranscriptomic profling of m6A RNA methylation in renal epithelial tubular cells stimulated with calcium oxalate crystals through microarray analysis | Yang B Y,et al | Urolithiasis | 2023 | 2.86 | mRNA & lncRNA Epitranscriptomic Array |
| Characterization of the m6A Epitranscriptome in Fibroblast Senescence | Kotb Abdelmohsen,et al | Molecular and Cellular Biology | 2026 | 2.8 | mRNA & lncRNA Epitranscriptomic Array |
| METTL16 promotes corneal nerve regeneration in diabetic corneal neuropathy | Zhang Y, et al | Experimental Eye Research | 2025 | 2.7 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Epitranscriptomic Analysis of the Ventral Hippocampus in a Mouse Model of Post-Traumatic Stress Disorder Following Deep Brain Stimulation Treatment of the Basolateral Amygdala | Ma M, et al | brain science | 2025 | 2.7 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| 5-MethylcytosineAnalysisofmiRNAsinMinimalChange Disease | Zeng H, et al | Biotechnol Appl Biochem | 2025 | 2.7 | Small RNA Modification Array |
| Genome-wide analysis of m6A-modified circRNAs in the mouse model of myocardial injury induced by obstructive sleep apnea | Lan J, et al | Bmc Pulmonary Medicine | 2025 | 2.6 | circRNA Epitranscriptomic Array · m6A |
| N6-methyladenosine (m6A) dysregulation contributes to network excitability in temporal lobe epilepsy | Justine Mathoux | Epigenomics | 2025 | 2.6 | m6A Single-Nucleotide Array · Human or Mouse m6A Single Nucleotide Array (8 × 15K) |
| Overexpression of METTL3 in lung cancer cells inhibits radiation-induced bystander effect | Zhang Y, et al | Biochemical and Biophysical Research Communications | 2025 | 2.5 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Signatures of miRNA 5-methylcytosine modification profile and potential immune-related target gene regulation in diabetic kidney disease | Yang Z, et al | Gene | 2025 | 2.4 | Small RNA Modification Array · m5C |
| Unveiling molecular mechanisms and therapeutic targets in HbH-CS disease: a focus on oxidative stress and mitochondrial dysfunction | Liuying Nong,et al | Biological Chemistry | 2026 | 2.3 | mRNA & lncRNA Epitranscriptomic Array |
| Epitranscriptome of the ventral tegmental area in a deep brain-stimulated chronic unpredictable mild stress mouse model | Song N, et al. | Translational Neuroscience | 2020 | 1.76 | mRNA & lncRNA Epitranscriptomic Array · 1911168 |
| Data set of m6A Methylation-Related RNAs from patients of papillary thyroid carcinoma without autoimmune thyroid disease | Lin Y, et al | Data in Brief | 2025 | 1.4 | mRNA & lncRNA Epitranscriptomic Array · m6A |
| Cold exposure aggravates myocardial ischemia-reperfusion injury via m6A-mediated circRNA-mRNA regulatory networks | Wu Han, et al | Frigid Zone Medicine | 2026 | — | circRNA Epitranscriptomic Array |
| Knockdown of Cav1 suppresses mitochondrial function and m6A modification and expression of key gene mRNAs in mouse hepatocytes | Ding Shanshan | Journal of Southern Medical University | 2025 | — | mRNA & lncRNA Epitranscriptomic Array · m6A |
| NSUN2-mediated m5C modification facilitates CD4+ T cell activation in patients with systemic lupus erythematosus | Chen Wenwen, et al | Journal of Wenzhou Medical University | 2024 | — | mRNA & lncRNA Epitranscriptomic Array · m5C |
| Identication and exploration of potential N6-methylation related mRNAs in endometriosis | He Y,et al | Research Square | 2024 | — | mRNA & lncRNA Epitranscriptomic Array |
| m6A reader IGF2BP2-stabilized lncRNA LHX1-DT inhibits renal cell carcinoma (RCC) cell proliferation and invasion by sponging miR-590-5p | Wang K,et al | Research Square | 2024 | — | mRNA & lncRNA Epitranscriptomic Array |
| ALKBH5-dependent upregulation of circARHGEF12 by Oridonin impairs gastric cancer progression and cisplatin resistance via regulating miR-130b 5p/LATS2 signaling | Yang Y, et al | Reaearch Square | 2024 | — | circRNA Epitranscriptomic Array · m6A |
02Method papers cited on this site
These are the papers cited across the modification, RIP-sequencing and array pages. Each entry is taken from Crossref rather than retyped, and the DOI resolves to the publisher record.
They introduce the chemistry or analysis behind a service. Customer studies that used those services are listed in the section above.
| Citation | Service | DOI |
|---|---|---|
| Gao Y, Hou J, Wei S, et al. Transcriptome-wide mapping of N3-methylcytidine modification at single-base resolution. Nucleic Acids Research 53(5) 2025. | Single-Nucleotide RNA m3C Modification Seq (m3C-IP-seq) | 10.1093/nar/gkaf153 |
| Ju CW, Li H, Jiang B, et al. Quantitative CRACI reveals transcriptome-wide distribution of RNA dihydrouridine at base resolution. Nature Communications 16(1) 2025. | Single-Nucleotide RNA Dihydrouridine (D) Modification Seq (CRACI-seq) | 10.1038/s41467-025-63918-w |
| Sun H, Lu B, Zhang Z, et al. Mild and ultrafast GLORI enables absolute quantification of m6A methylome from low-input samples. Nature Methods 22(6):1226-1236 2025. | Single-Nucleotide RNA m6A Modification Seq (GLORI2-seq) | 10.1038/s41592-025-02680-9 |
| Wang P, Ye C, Zhao M, et al. Small-molecule-catalysed deamination enables transcriptome-wide profiling of N6-methyladenosine in RNA. Nature Chemistry 17(7):1042-1052 2025. | Single-Nucleotide RNA m6A Modification Seq (CAM-seq) | 10.1038/s41557-025-01801-3 |
| Dai Q, Ye C, Irkliyenko I, et al. Ultrafast bisulfite sequencing detection of 5-methylcytosine in DNA and RNA. Nature Biotechnology 42(10) 2024. | Single-Nucleotide RNA m5C Modification Seq (BS-seq) | 10.1038/s41587-023-02034-w |
| Kvolik Pavić A, Čonkaš J, Mumlek I, et al. Clinician’s Guide to Epitranscriptomics: An Example of N1-Methyladenosine (m1A) RNA Modification and Cancer. Life 14(10):1230 2024. | Single-Nucleotide RNA m1A Modification Seq (m1A-Quant-seq) | 10.3390/life14101230 |
| Pajdzik K, Lyu R, Dou X, et al. Chemical manipulation of m 1 A mediates its detection in human tRNA. RNA 30(5):548-559 2024. | Single-Nucleotide RNA m1A Modification Seq (m1A-Quant-seq) | 10.1261/rna.079966.124 |
| Xu H, Kong L, Cheng J, et al. Absolute quantitative and base-resolution sequencing reveals comprehensive landscape of pseudouridine across the human transcriptome. Nature Methods 21(11):2024-2033 2024. | Single-Nucleotide RNA Pseudouridine (Ψ) & Inosine (I) Modification Seq (BACS-seq) Single-Nucleotide RNA Pseudouridine (Ψ) Modification Seq (BACS-seq) | 10.1038/s41592-024-02439-8 |
| Eom S, Peak J, Park J, et al. Widespread 8-oxoguanine modifications of miRNA seeds differentially regulate redox-dependent cancer development. Nature Cell Biology 25(9):1369-1383 2023. | Single-Nucleotide RNA O8G Modification Seq (O8G-miSeq) | 10.1038/s41556-023-01209-6 |
| Arango D, Sturgill D, Yang R, et al. Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine. Molecular Cell 82(15):2797-2814.e11 2022. | Single-Nucleotide RNA ac4C Modification Seq (RedaC:T-seq) | 10.1016/j.molcel.2022.05.016 |
| Dai Q, Zhang LS, Sun HL, et al. Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution. Nature Biotechnology 41(3):344-354 2022. | Single-Nucleotide RNA Pseudouridine (Ψ) Modification Seq (BID-seq) | 10.1038/s41587-022-01505-w |
| Liu C, Sun H, Yi Y, et al. Absolute quantification of single-base m6A methylation in the mammalian transcriptome using GLORI. Nature Biotechnology 41(3):355-366 2022. | Single-Nucleotide RNA m6A Modification Seq (GLORI2-seq) | 10.1038/s41587-022-01487-9 |
| Zhang LS, Ju CW, Liu C, et al. m 7 G-quant-seq: Quantitative Detection of RNA Internal N 7 -Methylguanosine. ACS Chemical Biology 17(12):3306-3312 2022. | Single-Nucleotide RNA m7G Modification Seq (m7G-Quant-seq) | 10.1021/acschembio.2c00792 |
| Cui J, Liu Q, Sendinc E, et al. Nucleotide resolution profiling of m3C RNA modification by HAC-seq. Nucleic Acids Research 49(5):e27-e27 2020. | Single-Nucleotide RNA m3C Modification Seq (HAC-seq) | 10.1093/nar/gkaa1186 |
| Seok H, Lee H, Lee S, et al. Position-specific oxidation of miR-1 encodes cardiac hypertrophy. Nature 584(7820):279-285 2020. | Single-Nucleotide RNA O8G Modification Seq (O8G-miSeq) | 10.1038/s41586-020-2586-0 |
| Boulias K, Toczydłowska-Socha D, Hawley BR, et al. Identification of the m6Am Methyltransferase PCIF1 Reveals the Location and Functions of m6Am in the Transcriptome. Molecular Cell 75(3):631-643.e8 2019. | RNA m6Am Modification Profile (m6Am-Exo-Seq) | 10.1016/j.molcel.2019.06.006 |
| Garcia-Campos MA, Edelheit S, Toth U, et al. Deciphering the “m6A Code” via Antibody-Independent Quantitative Profiling. Cell 178(3):731-747.e16 2019. | Single-Nucleotide RNA m6A Modification Seq (CAM-seq) | 10.1016/j.cell.2019.06.013 |
| Ringeard M, Marchand V, Decroly E, et al. FTSJ3 is an RNA 2′-O-methyltransferase recruited by HIV to avoid innate immune sensing. Nature 565(7740):500-504 2019. | Single-Nucleotide RNA 2'-O-Methylation Modification Seq (NM-seq) | 10.1038/s41586-018-0841-4 |
| Zhang LS, Liu C, Ma H, et al. Transcriptome-wide Mapping of Internal N7-Methylguanosine Methylome in Mammalian mRNA. Molecular Cell 74(6):1304-1316.e8 2019. | RNA m7G Modification Profile (MeRIP-Seq) | 10.1016/j.molcel.2019.03.036 |
| Arango D, Sturgill D, Alhusaini N, et al. Acetylation of Cytidine in mRNA Promotes Translation Efficiency. Cell 175(7):1872-1886.e24 2018. | RNA ac4C Modification Profile (acRIP-Seq) | 10.1016/j.cell.2018.10.030 |
| Dai Q, Moshitch-Moshkovitz S, Han D, et al. Nm-seq maps 2′-O-methylation sites in human mRNA with base precision. Nature Methods 14(7):695-698 2017. | Single-Nucleotide RNA 2'-O-Methylation Modification Seq (NM-seq) | 10.1038/nmeth.4294 |
| Li X, Xiong X, Zhang M, et al. Base-Resolution Mapping Reveals Distinct m1A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts. Molecular Cell 68(5):993-1005.e9 2017. | Single-Nucleotide RNA m1A Modification Seq (m1A-Quant-seq) | 10.1016/j.molcel.2017.10.019 |
| Delatte B, Wang F, Ngoc LV, et al. Transcriptome-wide distribution and function of RNA hydroxymethylcytosine. Science 351(6270):282-285 2016. | RNA 5hmC Modification Profile (hMeRIP-Seq) | 10.1126/science.aac5253 |
| Li X, Xiong X, Wang K, et al. Transcriptome-wide mapping reveals reversible and dynamic N1-methyladenosine methylome. Nature Chemical Biology 12(5):311-316 2016. | RNA m1A Modification Profile (MeRIP-Seq) | 10.1038/nchembio.2040 |
| Mauer J, Luo X, Blanjoie A, et al. Reversible methylation of m6Am in the 5′ cap controls mRNA stability. Nature 541(7637):371-375 2016. | RNA m6Am Modification Profile (m6Am-Exo-Seq) | 10.1038/nature21022 |
| Carlile TM, Rojas-Duran MF, Zinshteyn B, et al. Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells. Nature 515(7525):143-146 2014. | RNA Pseudouridine (Ψ) Modification Profile (Ψ-RIP-Seq) | 10.1038/nature13802 |
| Dominissini D, Moshitch-Moshkovitz S, Schwartz S, et al. Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq. Nature 485(7397):201-206 2012. | RNA m6A Modification Profile (MeRIP-Seq) | 10.1038/nature11112 |
| Meyer KD, Saletore Y, Zumbo P, et al. Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons. Cell 149(7):1635-1646 2012. | RNA m6A Modification Profile (MeRIP-Seq) | 10.1016/j.cell.2012.05.003 |
| Squires JE, Patel HR, Nousch M, et al. Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA. Nucleic Acids Research 40(11):5023-5033 2012. | RNA m5C Modification Profile (MeRIP-Seq) | 10.1093/nar/gks144 |
| Kim SK, Kim JY, Yokoyama S, et al. Misreading of RNA Templates Containing 8-Oxo-7,8-Dihydroguanosine Or 8-Oxo-2′-O-Methylguanosine in cDNA Synthesis by Reverse Transcriptases. Nucleosides and Nucleotides 18(6-7):1335-1337 1999. | RNA O8G Modification Profile (O8G-IP-Seq) | 10.1080/07328319908044709 |
| Frommer M, McDonald LE, Millar DS, et al. A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands.. Proceedings of the National Academy of Sciences 89(5):1827-1831 1992. | Single-Nucleotide RNA m5C Modification Seq (BS-seq) | 10.1073/pnas.89.5.1827 |
03FAQ
How are customer publications selected?
Only studies that used an RNA modification product line are kept: the epitranscriptomic and small RNA modification arrays, the m6A single-nucleotide array, MeRIP-seq and LC-MS modification analysis. General expression arrays and DNA methylation studies are left out, so the list stays on the topic of this portal rather than doubling as a general citation list.
Why is the list sorted by impact factor?
A high-to-low IF order puts the most visible journals at the top, which is where most readers start when they want to see how far a technology has travelled. Records without a listed IF appear after the ranked entries, so nothing is dropped from the list for lack of that number.
How is this different from the method papers below?
Method papers introduced an assay: they describe the chemistry and are cited on the method pages. Customer publications are studies that ran those assays on real projects and reported their own biology. The two groups answer different questions, so they are kept apart in the two tables above.
Can a paper be added to this list?
Yes. Send the citation and state which Arraystar service the study used, since that is what decides which group the entry joins and whether it belongs on the modification list at all. Entries are added from the customer publication workbook once that check is done.
Does this replace the customer publications page?
Yes. The full customer list and the method papers now live together on this page, so there is one place to look for either kind of citation. Links that used to point at the older customer-publications page resolve here instead, and nothing was dropped in the move.