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Profile m1A, m3C, m1G, m2,2G in tRNAs at Single-base Resolution
tRNA Modification Sequencing


Arraystar tRNA Modification Seq - m1A/m3C/m1G/m2,2G is designed to simultaneously and quantitatively profile tRNAs modified with multiple methylations (m1A, m3C, m1G, m2,2G) at single-base resolution. The modification is detected by methylation induced mutation index (MI) at each base position compared with its demethylase-treated tRNA. Among m1A, m3C, m1G, and m2,2G modifications, the m1G and m2,2G are further distinguished by their known distinct base positions in mammalian tRNAs (m1G at 9 and 37; m2,2G at 26 tRNA base positions).


Benefits:

Multiple methylation modification detection.
Simultaneously profile m1A, m3C, m1G and m2,2G modifications in tRNAs

High efficiency methylation removal. Efficiently remove internal and terminal modifications in the demethylase-treated tRNA.

Single-base resolution. Identify the exact site of m1A, m3C, m1G and m2,2G methylation modifications by comparing demethylase-untreated tRNA with demethylase-treated tRNA side by side (Fig. 1).

Comprehensive tRNA Epitranscriptomic Analysis
Analyze modifications sites, methylation levels, and tRNA expression all at once.

Integrated tRNA Solutions. Work well together with our broad portfolio of tRNA research technologies:tRNA PCR array,LC-MS based tRNA modification analysis,tRF&tiRNA-seq, and tRF&tiRNA PCR array.


Figure 1. Single-base resolution by tRNA Modification Seq.



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Selected Publications

• Epitranscriptomic Array
   [PMID: 38355624] Xiong YW, et al.
   (2024) Nature Communications

• Small RNA Modification Array
   [PMID: 38747146] Zhang J, et al.
   (2024) Circulation Research

• Circular RNA Array
   [PMID: 39695693] Hu Y, et al.
   (2024) Molecular Cancer

• tRNA Sequencing
   [PMID: 38519786] Wu X, et al.
   (2024) Nature Cancer

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