Simultaneously Profile the Major Small RNA Classes
- miRNA, pre-miRNA, tRNA, tsRNA, and snoRNA |
• Overcome biases from RNA modifications, PCR amplifications, and analysis inaccuracy in small RNA-seq
• Require as low as 100 ng total RNA, opening up new opportunities in tsRNA and tRNA biomarker research
• Tolerant lower qualities RNAs, such as degraded RNAs, serum/plasma/biofluid RNAs, and FFPE RNAs
Learn more>>
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microRNA:
| Mature-ID |
Mature-Sequence |
Seed |
High_Confidence |
Type |
| hsa-miR-188-5p |
CATCCCTTGCATGGTGGAGGG |
ATCCCTT |
Yes |
Mature |
tsRNA:
| tsRNA_type |
tsRNA-sequence |
tsRNA-length |
tsRNA-precursor |
Level |
Molecular mechanism |
| 3'tiRNA |
ATTCAAAGGTTCCGGGTTCGAGTCCC… |
39 |
tRNA-Arg-TCT-1 |
Potential |
Cytotoxicity to neurons |
Pre-microRNA:
| Precursor-Sequence |
GenomeLocus |
Promoter |
pri-miRNA |
pre-miRNA-cluster |
Mature-ID |
| CGGGGTGAGGTAA… |
chr22:46113686-46113768:+ |
p2@MIRLET7BHG, p4@MIR4763 |
NR_027033 |
let7a-3,let7b,4763 |
hsa-let-7b-5p |
tRNA:
| tRNA-Sequence |
Gene name |
GenomeLocus |
tRNA promoter locus |
pre-tRNA locus |
tRNA neighbouring gene |
| GGGGGTATAGCTC… |
tRNA-Ala-AGC-1-1 |
chr6:28795963-28796035:- |
chr6:28795963-28796135:- |
chr6:28795952-28796135:- |
XXbac-BPG308K3.5 |
snoRNA:
| snoRNA-sequence |
Length |
Gene name |
snoDB_symbol |
Box type |
Host gene id |
Host gene symbol |
Target count |
Target summary |
| CCAACATGGATAG… |
209 |
RNU105C |
RNU105C |
H/ACA |
/ |
/ |
2 |
Others |
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